Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn3Q9DCB1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn3Q9DCB1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hmgn3Q9DCB1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Gm7417-201ENSMUST00000192950 473 ntBASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hmgn3Q9DCB1 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Hmgn3Q9DCB1 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.27■□□□□ 0.36
Hmgn3Q9DCB1 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.27■□□□□ 0.36
Hmgn3Q9DCB1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn3Q9DCB1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Hmgn3Q9DCB1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmgn3Q9DCB1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hmgn3Q9DCB1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn3Q9DCB1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.27■□□□□ 0.35
Hmgn3Q9DCB1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn3Q9DCB1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.27■□□□□ 0.35
Hmgn3Q9DCB1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn3Q9DCB1 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmgn3Q9DCB1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.26■□□□□ 0.35
Hmgn3Q9DCB1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmgn3Q9DCB1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmgn3Q9DCB1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmgn3Q9DCB1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms