Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap3Q9D706 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rpap3Q9D706 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rpap3Q9D706 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rpap3Q9D706 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rpap3Q9D706 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rpap3Q9D706 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpap3Q9D706 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpap3Q9D706 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Rpap3Q9D706 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.27■□□□□ 0.84
Rpap3Q9D706 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.27■□□□□ 0.84
Rpap3Q9D706 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.27■□□□□ 0.84
Rpap3Q9D706 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rpap3Q9D706 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Rpap3Q9D706 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Gm38285-201ENSMUST00000192928 922 ntBASIC20.26■□□□□ 0.83
Rpap3Q9D706 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpap3Q9D706 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap3Q9D706 BC021767-201ENSMUST00000126387 1716 ntBASIC20.25■□□□□ 0.83
Rpap3Q9D706 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap3Q9D706 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap3Q9D706 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap3Q9D706 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap3Q9D706 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap3Q9D706 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap3Q9D706 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.25■□□□□ 0.83
Rpap3Q9D706 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap3Q9D706 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap3Q9D706 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap3Q9D706 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpap3Q9D706 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.25■□□□□ 0.83
Rpap3Q9D706 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Rpap3Q9D706 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.24■□□□□ 0.83
Rpap3Q9D706 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.24■□□□□ 0.83
Rpap3Q9D706 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rpap3Q9D706 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap3Q9D706 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.23■□□□□ 0.83
Rpap3Q9D706 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Gm6576-201ENSMUST00000169678 883 ntBASIC20.23■□□□□ 0.83
Rpap3Q9D706 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Mtag2-201ENSMUST00000058665 714 ntBASIC20.23■□□□□ 0.83
Rpap3Q9D706 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.23■□□□□ 0.83
Rpap3Q9D706 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpap3Q9D706 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpap3Q9D706 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpap3Q9D706 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 139.7 ms