Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Upk1aQ9D132 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Upk1aQ9D132 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Upk1aQ9D132 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1aQ9D132 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1aQ9D132 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Upk1aQ9D132 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1aQ9D132 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Upk1aQ9D132 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1aQ9D132 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1aQ9D132 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.45■□□□□ 0.38
Upk1aQ9D132 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1aQ9D132 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1aQ9D132 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1aQ9D132 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1aQ9D132 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Upk1aQ9D132 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.44■□□□□ 0.38
Upk1aQ9D132 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.44■□□□□ 0.38
Upk1aQ9D132 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.44■□□□□ 0.38
Upk1aQ9D132 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Upk1aQ9D132 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Upk1aQ9D132 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Smad6-203ENSMUST00000179458 273 ntBASIC17.42■□□□□ 0.38
Upk1aQ9D132 Mir7075-201ENSMUST00000184187 82 ntBASIC17.42■□□□□ 0.38
Upk1aQ9D132 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Upk1aQ9D132 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.41■□□□□ 0.38
Upk1aQ9D132 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Upk1aQ9D132 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.4■□□□□ 0.38
Upk1aQ9D132 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.4■□□□□ 0.38
Upk1aQ9D132 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Upk1aQ9D132 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms