Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chd1lQ9CXF7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chd1lQ9CXF7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chd1lQ9CXF7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chd1lQ9CXF7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Chd1lQ9CXF7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Chd1lQ9CXF7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Chd1lQ9CXF7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1lQ9CXF7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1lQ9CXF7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.75■□□□□ 0.91
Chd1lQ9CXF7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Chd1lQ9CXF7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1lQ9CXF7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd1lQ9CXF7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.75■□□□□ 0.91
Chd1lQ9CXF7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Chd1lQ9CXF7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1lQ9CXF7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1lQ9CXF7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1lQ9CXF7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1lQ9CXF7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Chd1lQ9CXF7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1lQ9CXF7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1lQ9CXF7 Golgb1-201ENSMUST00000023534 498 ntBASIC20.73■□□□□ 0.91
Chd1lQ9CXF7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Chd1lQ9CXF7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1lQ9CXF7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd1lQ9CXF7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.72■□□□□ 0.91
Chd1lQ9CXF7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Gm5812-201ENSMUST00000061073 957 ntBASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chd1lQ9CXF7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Chd1lQ9CXF7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chd1lQ9CXF7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms