Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc43Q9CR29 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc43Q9CR29 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc43Q9CR29 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc43Q9CR29 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc43Q9CR29 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc43Q9CR29 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.43■□□□□ 0.86
Ccdc43Q9CR29 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.43■□□□□ 0.86
Ccdc43Q9CR29 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.43■□□□□ 0.86
Ccdc43Q9CR29 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.43■□□□□ 0.86
Ccdc43Q9CR29 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc43Q9CR29 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Ccdc43Q9CR29 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc43Q9CR29 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc43Q9CR29 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc43Q9CR29 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc43Q9CR29 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc43Q9CR29 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc43Q9CR29 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc43Q9CR29 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc43Q9CR29 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.39■□□□□ 0.86
Ccdc43Q9CR29 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc43Q9CR29 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.39■□□□□ 0.85
Ccdc43Q9CR29 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc43Q9CR29 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc43Q9CR29 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc43Q9CR29 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc43Q9CR29 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc43Q9CR29 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Gm10493-201ENSMUST00000097270 612 ntBASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc43Q9CR29 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms