Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Gm20760-201ENSMUST00000179197 648 ntBASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retreg3Q9CQV4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retreg3Q9CQV4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Gm6211-202ENSMUST00000167849 925 ntBASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.47■□□□□ 0.55
Retreg3Q9CQV4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retreg3Q9CQV4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retreg3Q9CQV4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retreg3Q9CQV4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Retreg3Q9CQV4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Retreg3Q9CQV4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retreg3Q9CQV4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Gm7290-201ENSMUST00000104990 617 ntBASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Gm12918-201ENSMUST00000120234 636 ntBASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Gm15710-201ENSMUST00000121821 636 ntBASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Gm5075-201ENSMUST00000196916 622 ntBASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.45■□□□□ 0.54
Retreg3Q9CQV4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retreg3Q9CQV4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retreg3Q9CQV4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Retreg3Q9CQV4 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Retreg3Q9CQV4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retreg3Q9CQV4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retreg3Q9CQV4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retreg3Q9CQV4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retreg3Q9CQV4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retreg3Q9CQV4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.43■□□□□ 0.54
Retreg3Q9CQV4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retreg3Q9CQV4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retreg3Q9CQV4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retreg3Q9CQV4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retreg3Q9CQV4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retreg3Q9CQV4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retreg3Q9CQV4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retreg3Q9CQV4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Gm8520-201ENSMUST00000186517 868 ntBASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Gm4968-201ENSMUST00000071458 858 ntBASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.42■□□□□ 0.54
Retreg3Q9CQV4 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.41■□□□□ 0.54
Retreg3Q9CQV4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms