Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61bQ9CQS8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Gm13158-201ENSMUST00000122007 736 ntBASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 AC153961.1-201ENSMUST00000217760 385 ntBASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Haglr-201ENSMUST00000100000 2085 ntBASIC9.86□□□□□ -0.83
Sec61bQ9CQS8 Flg-201ENSMUST00000050758 1488 ntBASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Gm42900-201ENSMUST00000197184 2167 ntBASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Nrn1-203ENSMUST00000223611 1443 ntBASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Gm5540-201ENSMUST00000131852 1848 ntBASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Gm43006-201ENSMUST00000197702 1602 ntBASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Sec61bQ9CQS8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Notumos-201ENSMUST00000151998 2659 ntBASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Gm2399-201ENSMUST00000104944 225 ntBASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 AC107452.1-201ENSMUST00000227963 481 ntBASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Sec61bQ9CQS8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Sec61bQ9CQS8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61bQ9CQS8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Sec61bQ9CQS8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Sec61bQ9CQS8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms