Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.6■□□□□ 0.57
Lsm7Q9CQQ8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm7Q9CQQ8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lsm7Q9CQQ8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Dio3-201ENSMUST00000097228 1449 ntBASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Gm2399-201ENSMUST00000104944 225 ntBASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lsm7Q9CQQ8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm7Q9CQQ8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm7Q9CQQ8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm7Q9CQQ8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.58■□□□□ 0.57
Lsm7Q9CQQ8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm7Q9CQQ8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm7Q9CQQ8 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.58■□□□□ 0.57
Lsm7Q9CQQ8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Lsm7Q9CQQ8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lsm7Q9CQQ8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm7Q9CQQ8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.58■□□□□ 0.56
Lsm7Q9CQQ8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm7Q9CQQ8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Lsm7Q9CQQ8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm7Q9CQQ8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm7Q9CQQ8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lsm7Q9CQQ8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Gm22325-201ENSMUST00000158904 308 ntBASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Lsm7Q9CQQ8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lsm7Q9CQQ8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lsm7Q9CQQ8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Flg-201ENSMUST00000050758 1488 ntBASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Gm10812-201ENSMUST00000099864 546 ntBASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.54■□□□□ 0.56
Lsm7Q9CQQ8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms