Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim16Q99PP9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim16Q99PP9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim16Q99PP9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Trim16Q99PP9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Gm13146-201ENSMUST00000118508 780 ntBASIC17.92■□□□□ 0.46
Trim16Q99PP9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim16Q99PP9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim16Q99PP9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Gm26571-201ENSMUST00000181399 666 ntBASIC17.91■□□□□ 0.46
Trim16Q99PP9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim16Q99PP9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.91■□□□□ 0.46
Trim16Q99PP9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim16Q99PP9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim16Q99PP9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim16Q99PP9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim16Q99PP9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim16Q99PP9 Gm18671-201ENSMUST00000214826 683 ntBASIC17.9■□□□□ 0.46
Trim16Q99PP9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim16Q99PP9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim16Q99PP9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim16Q99PP9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim16Q99PP9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim16Q99PP9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim16Q99PP9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trim16Q99PP9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim16Q99PP9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Trim16Q99PP9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim16Q99PP9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim16Q99PP9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim16Q99PP9 Gm10849-201ENSMUST00000100397 618 ntBASIC17.89■□□□□ 0.45
Trim16Q99PP9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim16Q99PP9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim16Q99PP9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim16Q99PP9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim16Q99PP9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim16Q99PP9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim16Q99PP9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim16Q99PP9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim16Q99PP9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim16Q99PP9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.88■□□□□ 0.45
Trim16Q99PP9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.88■□□□□ 0.45
Trim16Q99PP9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim16Q99PP9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim16Q99PP9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim16Q99PP9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms