Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim33Q99PP7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Gm37179-201ENSMUST00000194862 823 ntBASIC18.17■□□□□ 0.5
Trim33Q99PP7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.17■□□□□ 0.5
Trim33Q99PP7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim33Q99PP7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trim33Q99PP7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Golph3-205ENSMUST00000228671 2842 ntBASIC18.16■□□□□ 0.5
Trim33Q99PP7 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim33Q99PP7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.15■□□□□ 0.5
Trim33Q99PP7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trim33Q99PP7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trim33Q99PP7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim33Q99PP7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim33Q99PP7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim33Q99PP7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim33Q99PP7 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim33Q99PP7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim33Q99PP7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim33Q99PP7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim33Q99PP7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim33Q99PP7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trim33Q99PP7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trim33Q99PP7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim33Q99PP7 Grk6-206ENSMUST00000224995 2971 ntBASIC18.12■□□□□ 0.49
Trim33Q99PP7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms