Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.89■□□□□ 0.45
Msh4Q99MT2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.89■□□□□ 0.45
Msh4Q99MT2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.89■□□□□ 0.45
Msh4Q99MT2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.89■□□□□ 0.45
Msh4Q99MT2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.89■□□□□ 0.45
Msh4Q99MT2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh4Q99MT2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Msh4Q99MT2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Msh4Q99MT2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Msh4Q99MT2 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.87■□□□□ 0.45
Msh4Q99MT2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh4Q99MT2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh4Q99MT2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Msh4Q99MT2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh4Q99MT2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh4Q99MT2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.87■□□□□ 0.45
Msh4Q99MT2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh4Q99MT2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh4Q99MT2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Msh4Q99MT2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.87■□□□□ 0.45
Msh4Q99MT2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.86■□□□□ 0.45
Msh4Q99MT2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Msh4Q99MT2 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Msh4Q99MT2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh4Q99MT2 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.85■□□□□ 0.45
Msh4Q99MT2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.85■□□□□ 0.45
Msh4Q99MT2 Gm6420-201ENSMUST00000193885 723 ntBASIC17.85■□□□□ 0.45
Msh4Q99MT2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh4Q99MT2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh4Q99MT2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Msh4Q99MT2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh4Q99MT2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh4Q99MT2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Msh4Q99MT2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.84■□□□□ 0.45
Msh4Q99MT2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.84■□□□□ 0.45
Msh4Q99MT2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Gm12933-201ENSMUST00000120203 872 ntBASIC17.84■□□□□ 0.45
Msh4Q99MT2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Nespas-201ENSMUST00000143738 1083 ntBASIC17.84■□□□□ 0.45
Msh4Q99MT2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Msh4Q99MT2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.84■□□□□ 0.45
Msh4Q99MT2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Msh4Q99MT2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Msh4Q99MT2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Msh4Q99MT2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Msh4Q99MT2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Msh4Q99MT2 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.83■□□□□ 0.45
Msh4Q99MT2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Msh4Q99MT2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Msh4Q99MT2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms