Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf111Q99ML9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf111Q99ML9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.82■□□□□ 0.44
Rnf111Q99ML9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf111Q99ML9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rnf111Q99ML9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf111Q99ML9 Fst-202ENSMUST00000223640 2612 ntBASIC17.81■□□□□ 0.44
Rnf111Q99ML9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf111Q99ML9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf111Q99ML9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rnf111Q99ML9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf111Q99ML9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Gm38205-201ENSMUST00000192243 258 ntBASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf111Q99ML9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.78■□□□□ 0.44
Rnf111Q99ML9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.78■□□□□ 0.44
Rnf111Q99ML9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf111Q99ML9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf111Q99ML9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf111Q99ML9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf111Q99ML9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf111Q99ML9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf111Q99ML9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rnf111Q99ML9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms