Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Gm27741-201ENSMUST00000185060 237 ntBASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Gm42545-201ENSMUST00000202755 922 ntBASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nkx6-1Q99MA9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nkx6-1Q99MA9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Gm18025-201ENSMUST00000221733 862 ntBASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Nkx6-1Q99MA9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-1Q99MA9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-1Q99MA9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-1Q99MA9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Nkx6-1Q99MA9 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.21■□□□□ 0.35
Nkx6-1Q99MA9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-1Q99MA9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-1Q99MA9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Nkx6-1Q99MA9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.21■□□□□ 0.35
Nkx6-1Q99MA9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Nkx6-1Q99MA9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Timm23-208ENSMUST00000226683 750 ntBASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Odf3b-204ENSMUST00000227834 930 ntBASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-1Q99MA9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-1Q99MA9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-1Q99MA9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms