Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Gm38285-201ENSMUST00000192928 922 ntBASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Gm18025-201ENSMUST00000221733 862 ntBASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcd2Q99JR8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.64■□□□□ 0.58
Smarcd2Q99JR8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Smarcd2Q99JR8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Gm6433-201ENSMUST00000118634 875 ntBASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcd2Q99JR8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 Gm43799-201ENSMUST00000201845 579 ntBASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 Gm42545-201ENSMUST00000202755 922 ntBASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Smarcd2Q99JR8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Smarcd2Q99JR8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd2Q99JR8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd2Q99JR8 Gm21814-202ENSMUST00000203277 873 ntBASIC18.61■□□□□ 0.57
Smarcd2Q99JR8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.61■□□□□ 0.57
Smarcd2Q99JR8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd2Q99JR8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd2Q99JR8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Smarcd2Q99JR8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Smarcd2Q99JR8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Smarcd2Q99JR8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Smarcd2Q99JR8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcd2Q99JR8 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcd2Q99JR8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Smarcd2Q99JR8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcd2Q99JR8 Gm10231-201ENSMUST00000181584 441 ntBASIC18.58■□□□□ 0.56
Smarcd2Q99JR8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms