Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.11■□□□□ 0.97
Smc1bQ920F6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc1bQ920F6 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.11■□□□□ 0.97
Smc1bQ920F6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc1bQ920F6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc1bQ920F6 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.09■□□□□ 0.97
Smc1bQ920F6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc1bQ920F6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.09■□□□□ 0.97
Smc1bQ920F6 Gm7860-201ENSMUST00000121190 879 ntBASIC21.09■□□□□ 0.97
Smc1bQ920F6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.09■□□□□ 0.97
Smc1bQ920F6 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.09■□□□□ 0.97
Smc1bQ920F6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Smc1bQ920F6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc1bQ920F6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc1bQ920F6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smc1bQ920F6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smc1bQ920F6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.08■□□□□ 0.97
Smc1bQ920F6 Gm18666-201ENSMUST00000190039 958 ntBASIC21.08■□□□□ 0.97
Smc1bQ920F6 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.08■□□□□ 0.97
Smc1bQ920F6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc1bQ920F6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smc1bQ920F6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.08■□□□□ 0.96
Smc1bQ920F6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smc1bQ920F6 AA386476-201ENSMUST00000098781 1665 ntBASIC21.08■□□□□ 0.96
Smc1bQ920F6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Gm37055-201ENSMUST00000191866 133 ntBASIC21.07■□□□□ 0.96
Smc1bQ920F6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.07■□□□□ 0.96
Smc1bQ920F6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smc1bQ920F6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Smc1bQ920F6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Smc1bQ920F6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc1bQ920F6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC21.05■□□□□ 0.96
Smc1bQ920F6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Smc1bQ920F6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.05■□□□□ 0.96
Smc1bQ920F6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc1bQ920F6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.05■□□□□ 0.96
Smc1bQ920F6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc1bQ920F6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC21.05■□□□□ 0.96
Smc1bQ920F6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Smc1bQ920F6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc1bQ920F6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smc1bQ920F6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc1bQ920F6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Smc1bQ920F6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.04■□□□□ 0.96
Smc1bQ920F6 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.04■□□□□ 0.96
Smc1bQ920F6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Smc1bQ920F6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc1bQ920F6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc1bQ920F6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Smc1bQ920F6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc1bQ920F6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc1bQ920F6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smc1bQ920F6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Smc1bQ920F6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smc1bQ920F6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms