Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdhb1Q91Y08 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhb1Q91Y08 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.11■□□□□ 0.65
Pcdhb1Q91Y08 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb1Q91Y08 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhb1Q91Y08 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb1Q91Y08 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb1Q91Y08 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Pcdhb1Q91Y08 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb1Q91Y08 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhb1Q91Y08 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhb1Q91Y08 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb1Q91Y08 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhb1Q91Y08 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb1Q91Y08 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb1Q91Y08 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb1Q91Y08 Gm42569-201ENSMUST00000200539 472 ntBASIC19.09■□□□□ 0.65
Pcdhb1Q91Y08 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.09■□□□□ 0.65
Pcdhb1Q91Y08 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.09■□□□□ 0.65
Pcdhb1Q91Y08 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdhb1Q91Y08 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb1Q91Y08 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb1Q91Y08 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb1Q91Y08 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb1Q91Y08 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb1Q91Y08 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb1Q91Y08 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb1Q91Y08 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb1Q91Y08 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb1Q91Y08 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Pcdhb1Q91Y08 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb1Q91Y08 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb1Q91Y08 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb1Q91Y08 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb1Q91Y08 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms