Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb18Q91Y02 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb18Q91Y02 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb18Q91Y02 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb18Q91Y02 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Gm10698-201ENSMUST00000182663 604 ntBASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb18Q91Y02 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb18Q91Y02 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb18Q91Y02 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb18Q91Y02 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb18Q91Y02 Gm13158-201ENSMUST00000122007 736 ntBASIC19.18■□□□□ 0.66
Pcdhb18Q91Y02 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.18■□□□□ 0.66
Pcdhb18Q91Y02 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhb18Q91Y02 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb18Q91Y02 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb18Q91Y02 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Gm715-201ENSMUST00000117865 831 ntBASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb18Q91Y02 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhb18Q91Y02 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb18Q91Y02 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhb18Q91Y02 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdhb18Q91Y02 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb18Q91Y02 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb18Q91Y02 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhb18Q91Y02 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdhb18Q91Y02 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms