Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgb1Q91XX8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgb1Q91XX8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhgb1Q91XX8 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.1■□□□□ 0.65
Pcdhgb1Q91XX8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Gm2559-201ENSMUST00000201323 363 ntBASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdhgb1Q91XX8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb1Q91XX8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb1Q91XX8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.08■□□□□ 0.65
Pcdhgb1Q91XX8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb1Q91XX8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb1Q91XX8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb1Q91XX8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 Gm44549-201ENSMUST00000208351 577 ntBASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb1Q91XX8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb1Q91XX8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb1Q91XX8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb1Q91XX8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb1Q91XX8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb1Q91XX8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb1Q91XX8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb1Q91XX8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb1Q91XX8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pcdhgb1Q91XX8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb1Q91XX8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb1Q91XX8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Dio3-201ENSMUST00000097228 1449 ntBASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb1Q91XX8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb1Q91XX8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb1Q91XX8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb1Q91XX8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb1Q91XX8 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb1Q91XX8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdhgb1Q91XX8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb1Q91XX8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb1Q91XX8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb1Q91XX8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb1Q91XX8 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms