Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhgb4Q91XX6 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhgb4Q91XX6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhgb4Q91XX6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb4Q91XX6 Fst-202ENSMUST00000223640 2612 ntBASIC19.43■□□□□ 0.7
Pcdhgb4Q91XX6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb4Q91XX6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb4Q91XX6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhgb4Q91XX6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb4Q91XX6 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb4Q91XX6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb4Q91XX6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhgb4Q91XX6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Nespas-201ENSMUST00000143738 1083 ntBASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Gm6420-201ENSMUST00000193885 723 ntBASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Gm10033-202ENSMUST00000211874 928 ntBASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhgb4Q91XX6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhgb4Q91XX6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhgb4Q91XX6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Pcdhgb4Q91XX6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhgb4Q91XX6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Gm42642-201ENSMUST00000200683 355 ntBASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Gm5874-201ENSMUST00000096101 508 ntBASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhgb4Q91XX6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms