Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Pcdh18Q8VHR0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Gm21956-201ENSMUST00000179946 522 ntBASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdh18Q8VHR0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh18Q8VHR0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh18Q8VHR0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh18Q8VHR0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh18Q8VHR0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh18Q8VHR0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdh18Q8VHR0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh18Q8VHR0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh18Q8VHR0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh18Q8VHR0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 127.7 ms