Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Lsm1Q8VC85 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lsm1Q8VC85 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.65■□□□□ 0.42
Lsm1Q8VC85 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Lsm1Q8VC85 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lsm1Q8VC85 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Lsm1Q8VC85 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Lsm1Q8VC85 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm1Q8VC85 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm1Q8VC85 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.41
Lsm1Q8VC85 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm1Q8VC85 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm1Q8VC85 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm1Q8VC85 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Lsm1Q8VC85 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm1Q8VC85 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Lsm1Q8VC85 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm1Q8VC85 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lsm1Q8VC85 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.64■□□□□ 0.41
Lsm1Q8VC85 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm1Q8VC85 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.63■□□□□ 0.41
Lsm1Q8VC85 Gm13534-201ENSMUST00000121169 513 ntBASIC17.63■□□□□ 0.41
Lsm1Q8VC85 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm1Q8VC85 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.63■□□□□ 0.41
Lsm1Q8VC85 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm1Q8VC85 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm1Q8VC85 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm1Q8VC85 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm1Q8VC85 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.63■□□□□ 0.41
Lsm1Q8VC85 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm1Q8VC85 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm1Q8VC85 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm1Q8VC85 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm1Q8VC85 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm1Q8VC85 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm1Q8VC85 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm1Q8VC85 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Lsm1Q8VC85 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm1Q8VC85 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm1Q8VC85 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm1Q8VC85 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm1Q8VC85 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm1Q8VC85 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.6■□□□□ 0.41
Lsm1Q8VC85 Fst-202ENSMUST00000223640 2612 ntBASIC17.59■□□□□ 0.41
Lsm1Q8VC85 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm1Q8VC85 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm1Q8VC85 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.59■□□□□ 0.41
Lsm1Q8VC85 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.59■□□□□ 0.41
Lsm1Q8VC85 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm1Q8VC85 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm1Q8VC85 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Lsm1Q8VC85 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm1Q8VC85 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm1Q8VC85 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.58■□□□□ 0.41
Lsm1Q8VC85 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.58■□□□□ 0.41
Lsm1Q8VC85 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm1Q8VC85 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm1Q8VC85 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm1Q8VC85 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.58■□□□□ 0.41
Lsm1Q8VC85 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm1Q8VC85 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Lsm1Q8VC85 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm1Q8VC85 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Lsm1Q8VC85 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Lsm1Q8VC85 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.58■□□□□ 0.4
Lsm1Q8VC85 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Lsm1Q8VC85 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Lsm1Q8VC85 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm1Q8VC85 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm1Q8VC85 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm1Q8VC85 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm1Q8VC85 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms