Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Gm2399-201ENSMUST00000104944 225 ntBASIC20.54■□□□□ 0.88
Atp2a1Q8R429 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Atp2a1Q8R429 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp2a1Q8R429 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.53■□□□□ 0.88
Atp2a1Q8R429 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp2a1Q8R429 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atp2a1Q8R429 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.53■□□□□ 0.88
Atp2a1Q8R429 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.53■□□□□ 0.88
Atp2a1Q8R429 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Atp2a1Q8R429 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atp2a1Q8R429 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Atp2a1Q8R429 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp2a1Q8R429 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Atp2a1Q8R429 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Atp2a1Q8R429 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.52■□□□□ 0.87
Atp2a1Q8R429 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atp2a1Q8R429 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Atp2a1Q8R429 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Atp2a1Q8R429 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Atp2a1Q8R429 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Atp2a1Q8R429 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp2a1Q8R429 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp2a1Q8R429 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Atp2a1Q8R429 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Atp2a1Q8R429 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Atp2a1Q8R429 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Atp2a1Q8R429 Gm10698-201ENSMUST00000182663 604 ntBASIC20.48■□□□□ 0.87
Atp2a1Q8R429 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.48■□□□□ 0.87
Atp2a1Q8R429 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.48■□□□□ 0.87
Atp2a1Q8R429 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.48■□□□□ 0.87
Atp2a1Q8R429 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms