Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pspc1Q8R326 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pspc1Q8R326 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pspc1Q8R326 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pspc1Q8R326 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.17■□□□□ 0.98
Pspc1Q8R326 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pspc1Q8R326 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pspc1Q8R326 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pspc1Q8R326 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pspc1Q8R326 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pspc1Q8R326 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pspc1Q8R326 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pspc1Q8R326 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pspc1Q8R326 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pspc1Q8R326 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.14■□□□□ 0.98
Pspc1Q8R326 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pspc1Q8R326 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pspc1Q8R326 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Pspc1Q8R326 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pspc1Q8R326 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.14■□□□□ 0.97
Pspc1Q8R326 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.14■□□□□ 0.97
Pspc1Q8R326 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pspc1Q8R326 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pspc1Q8R326 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Pspc1Q8R326 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.14■□□□□ 0.97
Pspc1Q8R326 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.13■□□□□ 0.97
Pspc1Q8R326 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.13■□□□□ 0.97
Pspc1Q8R326 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pspc1Q8R326 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pspc1Q8R326 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pspc1Q8R326 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pspc1Q8R326 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.12■□□□□ 0.97
Pspc1Q8R326 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pspc1Q8R326 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pspc1Q8R326 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pspc1Q8R326 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pspc1Q8R326 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Gm13158-201ENSMUST00000122007 736 ntBASIC21.11■□□□□ 0.97
Pspc1Q8R326 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pspc1Q8R326 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pspc1Q8R326 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms