Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Gm22325-201ENSMUST00000158904 308 ntBASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp40Q8R1F9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp40Q8R1F9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.75■□□□□ 0.75
Rpp40Q8R1F9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp40Q8R1F9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rpp40Q8R1F9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rpp40Q8R1F9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.75■□□□□ 0.75
Rpp40Q8R1F9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rpp40Q8R1F9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp40Q8R1F9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp40Q8R1F9 Gm12896-201ENSMUST00000118430 226 ntBASIC19.73■□□□□ 0.75
Rpp40Q8R1F9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rpp40Q8R1F9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.73■□□□□ 0.75
Rpp40Q8R1F9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp40Q8R1F9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp40Q8R1F9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp40Q8R1F9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp40Q8R1F9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rpp40Q8R1F9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 Gm2559-201ENSMUST00000201323 363 ntBASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.72■□□□□ 0.75
Rpp40Q8R1F9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Gm27275-201ENSMUST00000184318 272 ntBASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Gm37856-201ENSMUST00000191634 999 ntBASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rpp40Q8R1F9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp40Q8R1F9 Gm2399-201ENSMUST00000104944 225 ntBASIC19.7■□□□□ 0.74
Rpp40Q8R1F9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Rpp40Q8R1F9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.7■□□□□ 0.74
Rpp40Q8R1F9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp40Q8R1F9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp40Q8R1F9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp40Q8R1F9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rpp40Q8R1F9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Dio3-201ENSMUST00000097228 1449 ntBASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rpp40Q8R1F9 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rpp40Q8R1F9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms