Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sf3a1Q8K4Z5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sf3a1Q8K4Z5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sf3a1Q8K4Z5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sf3a1Q8K4Z5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.51■■□□□ 1.19
Sf3a1Q8K4Z5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
Sf3a1Q8K4Z5 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sf3a1Q8K4Z5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Sf3a1Q8K4Z5 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.51■■□□□ 1.19
Sf3a1Q8K4Z5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sf3a1Q8K4Z5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sf3a1Q8K4Z5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sf3a1Q8K4Z5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sf3a1Q8K4Z5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC22.49■■□□□ 1.19
Sf3a1Q8K4Z5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sf3a1Q8K4Z5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sf3a1Q8K4Z5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sf3a1Q8K4Z5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Sf3a1Q8K4Z5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sf3a1Q8K4Z5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
Sf3a1Q8K4Z5 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC22.48■■□□□ 1.19
Sf3a1Q8K4Z5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sf3a1Q8K4Z5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sf3a1Q8K4Z5 Gm29257-201ENSMUST00000186115 639 ntBASIC22.48■■□□□ 1.19
Sf3a1Q8K4Z5 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Sf3a1Q8K4Z5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sf3a1Q8K4Z5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sf3a1Q8K4Z5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Sf3a1Q8K4Z5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC22.48■■□□□ 1.19
Sf3a1Q8K4Z5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sf3a1Q8K4Z5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sf3a1Q8K4Z5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sf3a1Q8K4Z5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sf3a1Q8K4Z5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sf3a1Q8K4Z5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Sf3a1Q8K4Z5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC22.46■■□□□ 1.19
Sf3a1Q8K4Z5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC22.46■■□□□ 1.19
Sf3a1Q8K4Z5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sf3a1Q8K4Z5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.45■■□□□ 1.18
Sf3a1Q8K4Z5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
Sf3a1Q8K4Z5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Sf3a1Q8K4Z5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sf3a1Q8K4Z5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Sf3a1Q8K4Z5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sf3a1Q8K4Z5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sf3a1Q8K4Z5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Sf3a1Q8K4Z5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sf3a1Q8K4Z5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Sf3a1Q8K4Z5 Gm26524-201ENSMUST00000192339 390 ntBASIC22.44■■□□□ 1.18
Sf3a1Q8K4Z5 Gm37805-201ENSMUST00000192612 1094 ntBASIC22.44■■□□□ 1.18
Sf3a1Q8K4Z5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sf3a1Q8K4Z5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sf3a1Q8K4Z5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sf3a1Q8K4Z5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sf3a1Q8K4Z5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sf3a1Q8K4Z5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms