Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx54Q8K4L0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx54Q8K4L0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx54Q8K4L0 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx54Q8K4L0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
Ddx54Q8K4L0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC24.22■■□□□ 1.47
Ddx54Q8K4L0 AC166341.7-201ENSMUST00000221698 126 ntBASIC24.22■■□□□ 1.47
Ddx54Q8K4L0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Ddx54Q8K4L0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx54Q8K4L0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx54Q8K4L0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx54Q8K4L0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx54Q8K4L0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx54Q8K4L0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx54Q8K4L0 Gm38285-201ENSMUST00000192928 922 ntBASIC24.21■■□□□ 1.47
Ddx54Q8K4L0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx54Q8K4L0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx54Q8K4L0 Gm5540-201ENSMUST00000131852 1848 ntBASIC24.21■■□□□ 1.47
Ddx54Q8K4L0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx54Q8K4L0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Ddx54Q8K4L0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC24.2■■□□□ 1.47
Ddx54Q8K4L0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC24.2■■□□□ 1.47
Ddx54Q8K4L0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Ddx54Q8K4L0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ddx54Q8K4L0 Gm25016-201ENSMUST00000158399 131 ntBASIC24.2■■□□□ 1.46
Ddx54Q8K4L0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC24.2■■□□□ 1.46
Ddx54Q8K4L0 Gm2274-201ENSMUST00000184539 609 ntBASIC24.2■■□□□ 1.46
Ddx54Q8K4L0 Gm43353-201ENSMUST00000199224 1295 ntBASIC24.2■■□□□ 1.46
Ddx54Q8K4L0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ddx54Q8K4L0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Ddx54Q8K4L0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ddx54Q8K4L0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx54Q8K4L0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Ddx54Q8K4L0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC24.19■■□□□ 1.46
Ddx54Q8K4L0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx54Q8K4L0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC24.19■■□□□ 1.46
Ddx54Q8K4L0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx54Q8K4L0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx54Q8K4L0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
Ddx54Q8K4L0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx54Q8K4L0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx54Q8K4L0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx54Q8K4L0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx54Q8K4L0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx54Q8K4L0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx54Q8K4L0 Mir6349-201ENSMUST00000184059 97 ntBASIC24.17■■□□□ 1.46
Ddx54Q8K4L0 Gm44771-201ENSMUST00000206975 626 ntBASIC24.17■■□□□ 1.46
Ddx54Q8K4L0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx54Q8K4L0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx54Q8K4L0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Ddx54Q8K4L0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ddx54Q8K4L0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
Ddx54Q8K4L0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ddx54Q8K4L0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ddx54Q8K4L0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ddx54Q8K4L0 AC134329.2-201ENSMUST00000217897 428 ntBASIC24.16■■□□□ 1.46
Ddx54Q8K4L0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ddx54Q8K4L0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx54Q8K4L0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx54Q8K4L0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Ddx54Q8K4L0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Ddx54Q8K4L0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Ddx54Q8K4L0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx54Q8K4L0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx54Q8K4L0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx54Q8K4L0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Ddx54Q8K4L0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC24.14■■□□□ 1.46
Ddx54Q8K4L0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Ddx54Q8K4L0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC24.14■■□□□ 1.46
Ddx54Q8K4L0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Ddx54Q8K4L0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ddx54Q8K4L0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ddx54Q8K4L0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC24.14■■□□□ 1.45
Ddx54Q8K4L0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ddx54Q8K4L0 Gm28033-201ENSMUST00000184224 96 ntBASIC24.14■■□□□ 1.45
Ddx54Q8K4L0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ddx54Q8K4L0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Ddx54Q8K4L0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Ddx54Q8K4L0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Ddx54Q8K4L0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Ddx54Q8K4L0 Gm8309-201ENSMUST00000206627 1448 ntBASIC24.13■■□□□ 1.45
Ddx54Q8K4L0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Ddx54Q8K4L0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC24.13■■□□□ 1.45
Ddx54Q8K4L0 Gm27704-201ENSMUST00000185094 107 ntBASIC24.13■■□□□ 1.45
Ddx54Q8K4L0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Ddx54Q8K4L0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ddx54Q8K4L0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms