Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1aQ8CIG0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1aQ8CIG0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.8■□□□□ 0.92
Depdc1aQ8CIG0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.8■□□□□ 0.92
Depdc1aQ8CIG0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Depdc1aQ8CIG0 Gm10698-201ENSMUST00000182663 604 ntBASIC20.8■□□□□ 0.92
Depdc1aQ8CIG0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Depdc1aQ8CIG0 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.8■□□□□ 0.92
Depdc1aQ8CIG0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Depdc1aQ8CIG0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Depdc1aQ8CIG0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Mtag2-201ENSMUST00000058665 714 ntBASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Depdc1aQ8CIG0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.77■□□□□ 0.91
Depdc1aQ8CIG0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Depdc1aQ8CIG0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Depdc1aQ8CIG0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Depdc1aQ8CIG0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Depdc1aQ8CIG0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.76■□□□□ 0.91
Depdc1aQ8CIG0 Gm10252-201ENSMUST00000209541 832 ntBASIC20.76■□□□□ 0.91
Depdc1aQ8CIG0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Depdc1aQ8CIG0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Depdc1aQ8CIG0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Depdc1aQ8CIG0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Depdc1aQ8CIG0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Depdc1aQ8CIG0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Gm38285-201ENSMUST00000192928 922 ntBASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Depdc1aQ8CIG0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Depdc1aQ8CIG0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.73■□□□□ 0.91
Depdc1aQ8CIG0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Depdc1aQ8CIG0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Depdc1aQ8CIG0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.73■□□□□ 0.91
Depdc1aQ8CIG0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Depdc1aQ8CIG0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms