Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Rab11fip3Q8CHD8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rab11fip3Q8CHD8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC23.83■■□□□ 1.41
Rab11fip3Q8CHD8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Rab11fip3Q8CHD8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.83■■□□□ 1.41
Rab11fip3Q8CHD8 Arhgef33-211ENSMUST00000225658 473 ntBASIC23.83■■□□□ 1.41
Rab11fip3Q8CHD8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Rab11fip3Q8CHD8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rab11fip3Q8CHD8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rab11fip3Q8CHD8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Rab11fip3Q8CHD8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rab11fip3Q8CHD8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rab11fip3Q8CHD8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rab11fip3Q8CHD8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC23.82■■□□□ 1.4
Rab11fip3Q8CHD8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rab11fip3Q8CHD8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.82■■□□□ 1.4
Rab11fip3Q8CHD8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Rab11fip3Q8CHD8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rab11fip3Q8CHD8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Rab11fip3Q8CHD8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Rab11fip3Q8CHD8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Rab11fip3Q8CHD8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rab11fip3Q8CHD8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rab11fip3Q8CHD8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rab11fip3Q8CHD8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rab11fip3Q8CHD8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Rab11fip3Q8CHD8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rab11fip3Q8CHD8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Rab11fip3Q8CHD8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rab11fip3Q8CHD8 Gm7856-201ENSMUST00000117514 1493 ntBASIC23.81■■□□□ 1.4
Rab11fip3Q8CHD8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Rab11fip3Q8CHD8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC23.8■■□□□ 1.4
Rab11fip3Q8CHD8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rab11fip3Q8CHD8 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rab11fip3Q8CHD8 Gm10138-203ENSMUST00000206952 366 ntBASIC23.8■■□□□ 1.4
Rab11fip3Q8CHD8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rab11fip3Q8CHD8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC23.8■■□□□ 1.4
Rab11fip3Q8CHD8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Rab11fip3Q8CHD8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Rab11fip3Q8CHD8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Rab11fip3Q8CHD8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rab11fip3Q8CHD8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rab11fip3Q8CHD8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Rab11fip3Q8CHD8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC23.77■■□□□ 1.4
Rab11fip3Q8CHD8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rab11fip3Q8CHD8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Rab11fip3Q8CHD8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rab11fip3Q8CHD8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rab11fip3Q8CHD8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Rab11fip3Q8CHD8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC23.77■■□□□ 1.4
Rab11fip3Q8CHD8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rab11fip3Q8CHD8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rab11fip3Q8CHD8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Rab11fip3Q8CHD8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rab11fip3Q8CHD8 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.76■■□□□ 1.39
Rab11fip3Q8CHD8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rab11fip3Q8CHD8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Rab11fip3Q8CHD8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rab11fip3Q8CHD8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Rab11fip3Q8CHD8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.75■■□□□ 1.39
Rab11fip3Q8CHD8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rab11fip3Q8CHD8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rab11fip3Q8CHD8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC23.75■■□□□ 1.39
Rab11fip3Q8CHD8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC23.75■■□□□ 1.39
Rab11fip3Q8CHD8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC23.75■■□□□ 1.39
Rab11fip3Q8CHD8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rab11fip3Q8CHD8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rab11fip3Q8CHD8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Rab11fip3Q8CHD8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC23.74■■□□□ 1.39
Rab11fip3Q8CHD8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rab11fip3Q8CHD8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rab11fip3Q8CHD8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Rab11fip3Q8CHD8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rab11fip3Q8CHD8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Rab11fip3Q8CHD8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms