Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rdh1Q8CGV4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rdh1Q8CGV4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Gm11927-201ENSMUST00000118472 759 ntBASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Gm18666-201ENSMUST00000190039 958 ntBASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rdh1Q8CGV4 Notumos-201ENSMUST00000151998 2659 ntBASIC17.85■□□□□ 0.45
Rdh1Q8CGV4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.85■□□□□ 0.45
Rdh1Q8CGV4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Rdh1Q8CGV4 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.85■□□□□ 0.45
Rdh1Q8CGV4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh1Q8CGV4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rdh1Q8CGV4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 Gm13158-201ENSMUST00000122007 736 ntBASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rdh1Q8CGV4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rdh1Q8CGV4 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.83■□□□□ 0.45
Rdh1Q8CGV4 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.83■□□□□ 0.45
Rdh1Q8CGV4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rdh1Q8CGV4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rdh1Q8CGV4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh1Q8CGV4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.83■□□□□ 0.44
Rdh1Q8CGV4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh1Q8CGV4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.83■□□□□ 0.44
Rdh1Q8CGV4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rdh1Q8CGV4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.83■□□□□ 0.44
Rdh1Q8CGV4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh1Q8CGV4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.83■□□□□ 0.44
Rdh1Q8CGV4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rdh1Q8CGV4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rdh1Q8CGV4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 BC021767-201ENSMUST00000126387 1716 ntBASIC17.81■□□□□ 0.44
Rdh1Q8CGV4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms