Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Gm12918-201ENSMUST00000120234 636 ntBASIC19.34■□□□□ 0.69
Q8CD60 Gm15710-201ENSMUST00000121821 636 ntBASIC19.34■□□□□ 0.69
Q8CD60 Gm5075-201ENSMUST00000196916 622 ntBASIC19.34■□□□□ 0.69
Q8CD60 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.34■□□□□ 0.69
Q8CD60 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.34■□□□□ 0.69
Q8CD60 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8CD60 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Q8CD60 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Q8CD60 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Q8CD60 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Q8CD60 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Q8CD60 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Q8CD60 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.33■□□□□ 0.68
Q8CD60 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8CD60 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Q8CD60 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Q8CD60 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8CD60 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8CD60 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Q8CD60 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8CD60 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8CD60 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Q8CD60 Gm12933-201ENSMUST00000120203 872 ntBASIC19.32■□□□□ 0.68
Q8CD60 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.32■□□□□ 0.68
Q8CD60 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.32■□□□□ 0.68
Q8CD60 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8CD60 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8CD60 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8CD60 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Q8CD60 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Q8CD60 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8CD60 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Q8CD60 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8CD60 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8CD60 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Q8CD60 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.31■□□□□ 0.68
Q8CD60 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8CD60 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8CD60 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Q8CD60 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Q8CD60 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.3■□□□□ 0.68
Q8CD60 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8CD60 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8CD60 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8CD60 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Q8CD60 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Q8CD60 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.3■□□□□ 0.68
Q8CD60 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8CD60 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8CD60 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8CD60 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.3■□□□□ 0.68
Q8CD60 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Q8CD60 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q8CD60 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Q8CD60 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q8CD60 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q8CD60 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Q8CD60 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Q8CD60 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Q8CD60 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q8CD60 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q8CD60 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q8CD60 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Q8CD60 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8CD60 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Q8CD60 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8CD60 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Q8CD60 Gm10602-201ENSMUST00000098239 609 ntBASIC19.28■□□□□ 0.68
Q8CD60 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8CD60 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8CD60 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8CD60 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Q8CD60 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8CD60 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Q8CD60 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q8CD60 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.27■□□□□ 0.68
Q8CD60 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q8CD60 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Q8CD60 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Q8CD60 Gm29257-201ENSMUST00000186115 639 ntBASIC19.27■□□□□ 0.68
Q8CD60 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.27■□□□□ 0.68
Q8CD60 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Q8CD60 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Q8CD60 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q8CD60 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Q8CD60 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.26■□□□□ 0.67
Q8CD60 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Q8CD60 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q8CD60 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Q8CD60 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.26■□□□□ 0.67
Q8CD60 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q8CD60 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q8CD60 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q8CD60 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q8CD60 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q8CD60 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q8CD60 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q8CD60 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q8CD60 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q8CD60 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms