Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.11■□□□□ 0.81
Lin9Q8C735 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin9Q8C735 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin9Q8C735 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin9Q8C735 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin9Q8C735 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin9Q8C735 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin9Q8C735 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin9Q8C735 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lin9Q8C735 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lin9Q8C735 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Lin9Q8C735 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lin9Q8C735 Gm6365-201ENSMUST00000054711 744 ntBASIC20.1■□□□□ 0.81
Lin9Q8C735 Gm4968-201ENSMUST00000071458 858 ntBASIC20.1■□□□□ 0.81
Lin9Q8C735 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lin9Q8C735 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lin9Q8C735 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lin9Q8C735 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lin9Q8C735 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Lin9Q8C735 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lin9Q8C735 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.1■□□□□ 0.81
Lin9Q8C735 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Lin9Q8C735 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Lin9Q8C735 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.09■□□□□ 0.81
Lin9Q8C735 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Lin9Q8C735 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.09■□□□□ 0.81
Lin9Q8C735 Gm6420-201ENSMUST00000193885 723 ntBASIC20.09■□□□□ 0.81
Lin9Q8C735 Gm5408-201ENSMUST00000197998 747 ntBASIC20.09■□□□□ 0.81
Lin9Q8C735 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Lin9Q8C735 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Lin9Q8C735 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.09■□□□□ 0.81
Lin9Q8C735 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lin9Q8C735 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lin9Q8C735 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lin9Q8C735 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.08■□□□□ 0.81
Lin9Q8C735 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lin9Q8C735 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Lin9Q8C735 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lin9Q8C735 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lin9Q8C735 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lin9Q8C735 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lin9Q8C735 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Lin9Q8C735 Nespas-201ENSMUST00000143738 1083 ntBASIC20.07■□□□□ 0.8
Lin9Q8C735 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.07■□□□□ 0.8
Lin9Q8C735 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lin9Q8C735 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.07■□□□□ 0.8
Lin9Q8C735 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lin9Q8C735 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.07■□□□□ 0.8
Lin9Q8C735 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lin9Q8C735 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lin9Q8C735 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lin9Q8C735 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin9Q8C735 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin9Q8C735 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lin9Q8C735 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin9Q8C735 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin9Q8C735 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.06■□□□□ 0.8
Lin9Q8C735 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin9Q8C735 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin9Q8C735 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin9Q8C735 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.06■□□□□ 0.8
Lin9Q8C735 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin9Q8C735 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin9Q8C735 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lin9Q8C735 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Lin9Q8C735 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.05■□□□□ 0.8
Lin9Q8C735 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lin9Q8C735 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lin9Q8C735 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lin9Q8C735 Gm13534-201ENSMUST00000121169 513 ntBASIC20.05■□□□□ 0.8
Lin9Q8C735 Gm10653-202ENSMUST00000139570 835 ntBASIC20.05■□□□□ 0.8
Lin9Q8C735 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lin9Q8C735 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Lin9Q8C735 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lin9Q8C735 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin9Q8C735 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin9Q8C735 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Lin9Q8C735 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin9Q8C735 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin9Q8C735 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin9Q8C735 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin9Q8C735 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.04■□□□□ 0.8
Lin9Q8C735 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin9Q8C735 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Lin9Q8C735 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lin9Q8C735 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms