Protein–RNA interactions for Protein: Q8C4X2

Csnk1g3, Casein kinase I isoform gamma-3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1g3Q8C4X2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 Gm21814-202ENSMUST00000203277 873 ntBASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 Gm5417-201ENSMUST00000079706 384 ntBASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Csnk1g3Q8C4X2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Csnk1g3Q8C4X2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Csnk1g3Q8C4X2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Csnk1g3Q8C4X2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Csnk1g3Q8C4X2 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.33■□□□□ 0.69
Csnk1g3Q8C4X2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Csnk1g3Q8C4X2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Csnk1g3Q8C4X2 Gm42545-201ENSMUST00000202755 922 ntBASIC19.33■□□□□ 0.68
Csnk1g3Q8C4X2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Csnk1g3Q8C4X2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Csnk1g3Q8C4X2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Csnk1g3Q8C4X2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Csnk1g3Q8C4X2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Csnk1g3Q8C4X2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Csnk1g3Q8C4X2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Csnk1g3Q8C4X2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Csnk1g3Q8C4X2 Gm9987-201ENSMUST00000069768 567 ntBASIC19.32■□□□□ 0.68
Csnk1g3Q8C4X2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Csnk1g3Q8C4X2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Csnk1g3Q8C4X2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Mir6349-201ENSMUST00000184059 97 ntBASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Gm37292-201ENSMUST00000192062 758 ntBASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Csnk1g3Q8C4X2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Csnk1g3Q8C4X2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Gm6433-201ENSMUST00000118634 875 ntBASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Csnk1g3Q8C4X2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Gm43799-201ENSMUST00000201845 579 ntBASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Csnk1g3Q8C4X2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Csnk1g3Q8C4X2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.27■□□□□ 0.68
Csnk1g3Q8C4X2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.27■□□□□ 0.68
Csnk1g3Q8C4X2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.27■□□□□ 0.68
Csnk1g3Q8C4X2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Csnk1g3Q8C4X2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Csnk1g3Q8C4X2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.27■□□□□ 0.67
Csnk1g3Q8C4X2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Csnk1g3Q8C4X2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms