Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brat1Q8C3R1 Golph3-205ENSMUST00000228671 2842 ntBASIC19.39■□□□□ 0.69
Brat1Q8C3R1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Brat1Q8C3R1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Brat1Q8C3R1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Brat1Q8C3R1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brat1Q8C3R1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brat1Q8C3R1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brat1Q8C3R1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brat1Q8C3R1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Gm20049-201ENSMUST00000219950 730 ntBASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Brat1Q8C3R1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Gm12527-201ENSMUST00000117967 564 ntBASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Brat1Q8C3R1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brat1Q8C3R1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brat1Q8C3R1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brat1Q8C3R1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.35■□□□□ 0.69
Brat1Q8C3R1 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.35■□□□□ 0.69
Brat1Q8C3R1 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.35■□□□□ 0.69
Brat1Q8C3R1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brat1Q8C3R1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brat1Q8C3R1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brat1Q8C3R1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brat1Q8C3R1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.33■□□□□ 0.69
Brat1Q8C3R1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.33■□□□□ 0.69
Brat1Q8C3R1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Gm2559-201ENSMUST00000201323 363 ntBASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brat1Q8C3R1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brat1Q8C3R1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brat1Q8C3R1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Brat1Q8C3R1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brat1Q8C3R1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Brat1Q8C3R1 Gm2399-201ENSMUST00000104944 225 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms