Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska3Q8C263 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ska3Q8C263 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.28■□□□□ 0.36
Ska3Q8C263 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska3Q8C263 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska3Q8C263 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ska3Q8C263 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska3Q8C263 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska3Q8C263 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska3Q8C263 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska3Q8C263 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ska3Q8C263 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ska3Q8C263 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ska3Q8C263 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ska3Q8C263 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ska3Q8C263 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ska3Q8C263 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ska3Q8C263 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ska3Q8C263 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ska3Q8C263 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ska3Q8C263 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ska3Q8C263 Mir5133-201ENSMUST00000174955 77 ntBASIC17.27■□□□□ 0.36
Ska3Q8C263 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ska3Q8C263 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ska3Q8C263 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ska3Q8C263 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.27■□□□□ 0.36
Ska3Q8C263 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ska3Q8C263 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Ska3Q8C263 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ska3Q8C263 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ska3Q8C263 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ska3Q8C263 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.27■□□□□ 0.35
Ska3Q8C263 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.27■□□□□ 0.35
Ska3Q8C263 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ska3Q8C263 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.26■□□□□ 0.35
Ska3Q8C263 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.26■□□□□ 0.35
Ska3Q8C263 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.26■□□□□ 0.35
Ska3Q8C263 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.26■□□□□ 0.35
Ska3Q8C263 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.26■□□□□ 0.35
Ska3Q8C263 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
Ska3Q8C263 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.26■□□□□ 0.35
Ska3Q8C263 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ska3Q8C263 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ska3Q8C263 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ska3Q8C263 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ska3Q8C263 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ska3Q8C263 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ska3Q8C263 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ska3Q8C263 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ska3Q8C263 Gm6211-202ENSMUST00000167849 925 ntBASIC17.25■□□□□ 0.35
Ska3Q8C263 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ska3Q8C263 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Ska3Q8C263 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ska3Q8C263 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.24■□□□□ 0.35
Ska3Q8C263 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ska3Q8C263 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ska3Q8C263 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ska3Q8C263 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ska3Q8C263 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Ska3Q8C263 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ska3Q8C263 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Ska3Q8C263 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.24■□□□□ 0.35
Ska3Q8C263 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ska3Q8C263 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ska3Q8C263 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ska3Q8C263 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ska3Q8C263 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ska3Q8C263 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ska3Q8C263 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ska3Q8C263 Grk6-206ENSMUST00000224995 2971 ntBASIC17.24■□□□□ 0.35
Ska3Q8C263 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ska3Q8C263 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ska3Q8C263 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Ska3Q8C263 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ska3Q8C263 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ska3Q8C263 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ska3Q8C263 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ska3Q8C263 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.23■□□□□ 0.35
Ska3Q8C263 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Ska3Q8C263 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.23■□□□□ 0.35
Ska3Q8C263 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.23■□□□□ 0.35
Ska3Q8C263 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ska3Q8C263 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ska3Q8C263 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ska3Q8C263 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ska3Q8C263 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Ska3Q8C263 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms