Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smim4Q8C1Q6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Gm38205-201ENSMUST00000192243 258 ntBASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smim4Q8C1Q6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.39■□□□□ 0.05
Smim4Q8C1Q6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim4Q8C1Q6 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.37■□□□□ 0.05
Smim4Q8C1Q6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim4Q8C1Q6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms