Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.19■□□□□ 0.34
Cpne1Q8C166 Gm6365-201ENSMUST00000054711 744 ntBASIC17.19■□□□□ 0.34
Cpne1Q8C166 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cpne1Q8C166 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne1Q8C166 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.18■□□□□ 0.34
Cpne1Q8C166 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne1Q8C166 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cpne1Q8C166 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.17■□□□□ 0.34
Cpne1Q8C166 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cpne1Q8C166 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.17■□□□□ 0.34
Cpne1Q8C166 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne1Q8C166 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.16■□□□□ 0.34
Cpne1Q8C166 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.16■□□□□ 0.34
Cpne1Q8C166 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.16■□□□□ 0.34
Cpne1Q8C166 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne1Q8C166 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne1Q8C166 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Cpne1Q8C166 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne1Q8C166 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne1Q8C166 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne1Q8C166 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cpne1Q8C166 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne1Q8C166 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cpne1Q8C166 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne1Q8C166 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.14■□□□□ 0.33
Cpne1Q8C166 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne1Q8C166 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cpne1Q8C166 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne1Q8C166 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne1Q8C166 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Cpne1Q8C166 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms