Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim47Q8C0E3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim47Q8C0E3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim47Q8C0E3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim47Q8C0E3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Trim47Q8C0E3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim47Q8C0E3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim47Q8C0E3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim47Q8C0E3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Trim47Q8C0E3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim47Q8C0E3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim47Q8C0E3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim47Q8C0E3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trim47Q8C0E3 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.41■□□□□ 0.86
Trim47Q8C0E3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim47Q8C0E3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim47Q8C0E3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trim47Q8C0E3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim47Q8C0E3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim47Q8C0E3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim47Q8C0E3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim47Q8C0E3 Gm27275-201ENSMUST00000184318 272 ntBASIC20.4■□□□□ 0.86
Trim47Q8C0E3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.4■□□□□ 0.86
Trim47Q8C0E3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim47Q8C0E3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim47Q8C0E3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trim47Q8C0E3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim47Q8C0E3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Trim47Q8C0E3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trim47Q8C0E3 Dio3-201ENSMUST00000097228 1449 ntBASIC20.39■□□□□ 0.85
Trim47Q8C0E3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Trim47Q8C0E3 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.39■□□□□ 0.85
Trim47Q8C0E3 Gm2559-201ENSMUST00000201323 363 ntBASIC20.39■□□□□ 0.85
Trim47Q8C0E3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim47Q8C0E3 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.39■□□□□ 0.85
Trim47Q8C0E3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim47Q8C0E3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.38■□□□□ 0.85
Trim47Q8C0E3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.38■□□□□ 0.85
Trim47Q8C0E3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim47Q8C0E3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim47Q8C0E3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.38■□□□□ 0.85
Trim47Q8C0E3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim47Q8C0E3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.38■□□□□ 0.85
Trim47Q8C0E3 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.38■□□□□ 0.85
Trim47Q8C0E3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim47Q8C0E3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim47Q8C0E3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim47Q8C0E3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.38■□□□□ 0.85
Trim47Q8C0E3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Gm22325-201ENSMUST00000158904 308 ntBASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Gm20760-201ENSMUST00000179197 648 ntBASIC20.37■□□□□ 0.85
Trim47Q8C0E3 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim47Q8C0E3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Trmt13-210ENSMUST00000198454 880 ntBASIC20.36■□□□□ 0.85
Trim47Q8C0E3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim47Q8C0E3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trim47Q8C0E3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms