Protein–RNA interactions for Protein: Q8BTU7

Rccd1, RCC1 domain-containing protein 1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rccd1Q8BTU7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rccd1Q8BTU7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rccd1Q8BTU7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rccd1Q8BTU7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rccd1Q8BTU7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rccd1Q8BTU7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rccd1Q8BTU7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Rccd1Q8BTU7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Rccd1Q8BTU7 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rccd1Q8BTU7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Gm15546-201ENSMUST00000122095 826 ntBASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rccd1Q8BTU7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rccd1Q8BTU7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Rccd1Q8BTU7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rccd1Q8BTU7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rccd1Q8BTU7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.62■□□□□ 0.57
Rccd1Q8BTU7 Spcs1-204ENSMUST00000226782 949 ntBASIC18.62■□□□□ 0.57
Rccd1Q8BTU7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rccd1Q8BTU7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rccd1Q8BTU7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rccd1Q8BTU7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rccd1Q8BTU7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Rccd1Q8BTU7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 109.4 ms