Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cpne4Q8BLR2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
Cpne4Q8BLR2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne4Q8BLR2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne4Q8BLR2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne4Q8BLR2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne4Q8BLR2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne4Q8BLR2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Cpne4Q8BLR2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne4Q8BLR2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpne4Q8BLR2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpne4Q8BLR2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Gm26524-201ENSMUST00000192339 390 ntBASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.42■□□□□ 0.22
Cpne4Q8BLR2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Rab3c-203ENSMUST00000224180 967 ntBASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpne4Q8BLR2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpne4Q8BLR2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Cpne4Q8BLR2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cpne4Q8BLR2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 BC021767-201ENSMUST00000126387 1716 ntBASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Cpne4Q8BLR2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms