Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Smarcal1Q8BJL0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Gm38285-201ENSMUST00000192928 922 ntBASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Smarcal1Q8BJL0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcal1Q8BJL0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcal1Q8BJL0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcal1Q8BJL0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcal1Q8BJL0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcal1Q8BJL0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Smarcal1Q8BJL0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Smarcal1Q8BJL0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcal1Q8BJL0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.59■□□□□ 0.73
Smarcal1Q8BJL0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Smarcal1Q8BJL0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smarcal1Q8BJL0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcal1Q8BJL0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
Smarcal1Q8BJL0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcal1Q8BJL0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcal1Q8BJL0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smarcal1Q8BJL0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Smarcal1Q8BJL0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.58■□□□□ 0.72
Smarcal1Q8BJL0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Smarcal1Q8BJL0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcal1Q8BJL0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcal1Q8BJL0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smarcal1Q8BJL0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.57■□□□□ 0.72
Smarcal1Q8BJL0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcal1Q8BJL0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Smarcal1Q8BJL0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcal1Q8BJL0 Gm15375-201ENSMUST00000119510 849 ntBASIC19.57■□□□□ 0.72
Smarcal1Q8BJL0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.57■□□□□ 0.72
Smarcal1Q8BJL0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smarcal1Q8BJL0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Gm43183-201ENSMUST00000200632 547 ntBASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Gm21814-202ENSMUST00000203277 873 ntBASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Mtag2-201ENSMUST00000058665 714 ntBASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Smarcal1Q8BJL0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Gm6433-201ENSMUST00000118634 875 ntBASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smarcal1Q8BJL0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Gm18025-201ENSMUST00000221733 862 ntBASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smarcal1Q8BJL0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms