Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Gm12527-201ENSMUST00000117967 564 ntBASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim23Q8BGX0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Gm20049-201ENSMUST00000219950 730 ntBASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim23Q8BGX0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.72■□□□□ 0.43
Trim23Q8BGX0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim23Q8BGX0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Trim23Q8BGX0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.71■□□□□ 0.42
Trim23Q8BGX0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Trim23Q8BGX0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trim23Q8BGX0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim23Q8BGX0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Trim23Q8BGX0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim23Q8BGX0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trim23Q8BGX0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.7■□□□□ 0.42
Trim23Q8BGX0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim23Q8BGX0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.7■□□□□ 0.42
Trim23Q8BGX0 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.7■□□□□ 0.42
Trim23Q8BGX0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim23Q8BGX0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim23Q8BGX0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim23Q8BGX0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.68■□□□□ 0.42
Trim23Q8BGX0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms