Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp6nlQ80XC3 Gm5417-201ENSMUST00000079706 384 ntBASIC20.36■□□□□ 0.85
Usp6nlQ80XC3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp6nlQ80XC3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp6nlQ80XC3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.35■□□□□ 0.85
Usp6nlQ80XC3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Gm43183-201ENSMUST00000200632 547 ntBASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp6nlQ80XC3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Usp6nlQ80XC3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Usp6nlQ80XC3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp6nlQ80XC3 Gm6433-201ENSMUST00000118634 875 ntBASIC20.33■□□□□ 0.85
Usp6nlQ80XC3 Gm43799-201ENSMUST00000201845 579 ntBASIC20.33■□□□□ 0.85
Usp6nlQ80XC3 Gm21814-202ENSMUST00000203277 873 ntBASIC20.33■□□□□ 0.85
Usp6nlQ80XC3 Gm10138-203ENSMUST00000206952 366 ntBASIC20.33■□□□□ 0.85
Usp6nlQ80XC3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.33■□□□□ 0.85
Usp6nlQ80XC3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp6nlQ80XC3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Usp6nlQ80XC3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Usp6nlQ80XC3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp6nlQ80XC3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Usp6nlQ80XC3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp6nlQ80XC3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp6nlQ80XC3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp6nlQ80XC3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp6nlQ80XC3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Gm10231-201ENSMUST00000181584 441 ntBASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Gm10175-202ENSMUST00000208752 441 ntBASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp6nlQ80XC3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp6nlQ80XC3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 125.8 ms