Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vrk1Q80X41 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vrk1Q80X41 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vrk1Q80X41 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vrk1Q80X41 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vrk1Q80X41 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vrk1Q80X41 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vrk1Q80X41 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.52■□□□□ 0.4
Vrk1Q80X41 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Vrk1Q80X41 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.52■□□□□ 0.4
Vrk1Q80X41 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vrk1Q80X41 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Vrk1Q80X41 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Vrk1Q80X41 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vrk1Q80X41 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vrk1Q80X41 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vrk1Q80X41 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Vrk1Q80X41 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Vrk1Q80X41 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Vrk1Q80X41 Flg-201ENSMUST00000050758 1488 ntBASIC17.5■□□□□ 0.39
Vrk1Q80X41 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Vrk1Q80X41 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vrk1Q80X41 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vrk1Q80X41 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vrk1Q80X41 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vrk1Q80X41 Gm7977-201ENSMUST00000193787 748 ntBASIC17.49■□□□□ 0.39
Vrk1Q80X41 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.49■□□□□ 0.39
Vrk1Q80X41 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Vrk1Q80X41 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Vrk1Q80X41 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vrk1Q80X41 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Vrk1Q80X41 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vrk1Q80X41 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.48■□□□□ 0.39
Vrk1Q80X41 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vrk1Q80X41 Mir1199-201ENSMUST00000117015 119 ntBASIC17.48■□□□□ 0.39
Vrk1Q80X41 Gm13836-201ENSMUST00000121159 501 ntBASIC17.48■□□□□ 0.39
Vrk1Q80X41 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Vrk1Q80X41 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.48■□□□□ 0.39
Vrk1Q80X41 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.48■□□□□ 0.39
Vrk1Q80X41 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.48■□□□□ 0.39
Vrk1Q80X41 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vrk1Q80X41 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Vrk1Q80X41 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vrk1Q80X41 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Vrk1Q80X41 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.48■□□□□ 0.39
Vrk1Q80X41 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Vrk1Q80X41 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.47■□□□□ 0.39
Vrk1Q80X41 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.47■□□□□ 0.39
Vrk1Q80X41 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vrk1Q80X41 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vrk1Q80X41 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vrk1Q80X41 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vrk1Q80X41 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.46■□□□□ 0.39
Vrk1Q80X41 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms