Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim36Q80WG7 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim36Q80WG7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim36Q80WG7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Gm10033-202ENSMUST00000211874 928 ntBASIC17.73■□□□□ 0.43
Trim36Q80WG7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.73■□□□□ 0.43
Trim36Q80WG7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Grk6-206ENSMUST00000224995 2971 ntBASIC17.73■□□□□ 0.43
Trim36Q80WG7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim36Q80WG7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim36Q80WG7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim36Q80WG7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim36Q80WG7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim36Q80WG7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim36Q80WG7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Trim36Q80WG7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim36Q80WG7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim36Q80WG7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.72■□□□□ 0.43
Trim36Q80WG7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim36Q80WG7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim36Q80WG7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.72■□□□□ 0.43
Trim36Q80WG7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim36Q80WG7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim36Q80WG7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim36Q80WG7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim36Q80WG7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Gm18671-201ENSMUST00000214826 683 ntBASIC17.7■□□□□ 0.42
Trim36Q80WG7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim36Q80WG7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim36Q80WG7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim36Q80WG7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim36Q80WG7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
Trim36Q80WG7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim36Q80WG7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim36Q80WG7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim36Q80WG7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim36Q80WG7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim36Q80WG7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim36Q80WG7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim36Q80WG7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim36Q80WG7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim36Q80WG7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trim36Q80WG7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim36Q80WG7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim36Q80WG7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms