Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.5■□□□□ 0.55
Tnrc18Q80WC3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.5■□□□□ 0.55
Tnrc18Q80WC3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnrc18Q80WC3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tnrc18Q80WC3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnrc18Q80WC3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnrc18Q80WC3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tnrc18Q80WC3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 Mir6349-201ENSMUST00000184059 97 ntBASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tnrc18Q80WC3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.48■□□□□ 0.55
Tnrc18Q80WC3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.48■□□□□ 0.55
Tnrc18Q80WC3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc18Q80WC3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc18Q80WC3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc18Q80WC3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Tnrc18Q80WC3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc18Q80WC3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc18Q80WC3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tnrc18Q80WC3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tnrc18Q80WC3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc18Q80WC3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc18Q80WC3 Gm28033-201ENSMUST00000184224 96 ntBASIC18.46■□□□□ 0.55
Tnrc18Q80WC3 Gm44771-201ENSMUST00000206975 626 ntBASIC18.46■□□□□ 0.55
Tnrc18Q80WC3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc18Q80WC3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc18Q80WC3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tnrc18Q80WC3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Tnrc18Q80WC3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Tnrc18Q80WC3 Gm22697-201ENSMUST00000175194 63 ntBASIC18.45■□□□□ 0.54
Tnrc18Q80WC3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.45■□□□□ 0.54
Tnrc18Q80WC3 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.45■□□□□ 0.54
Tnrc18Q80WC3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnrc18Q80WC3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tnrc18Q80WC3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tnrc18Q80WC3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.45■□□□□ 0.54
Tnrc18Q80WC3 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.45■□□□□ 0.54
Tnrc18Q80WC3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Tnrc18Q80WC3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tnrc18Q80WC3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Tnrc18Q80WC3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc18Q80WC3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc18Q80WC3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc18Q80WC3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.43■□□□□ 0.54
Tnrc18Q80WC3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc18Q80WC3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.43■□□□□ 0.54
Tnrc18Q80WC3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc18Q80WC3 Gm7461-201ENSMUST00000058918 827 ntBASIC18.43■□□□□ 0.54
Tnrc18Q80WC3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tnrc18Q80WC3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tnrc18Q80WC3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms