Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh19Q80TF3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdh19Q80TF3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdh19Q80TF3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh19Q80TF3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh19Q80TF3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh19Q80TF3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh19Q80TF3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdh19Q80TF3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdh19Q80TF3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdh19Q80TF3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Gm10812-201ENSMUST00000099864 546 ntBASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Dio3-201ENSMUST00000097228 1449 ntBASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pcdh19Q80TF3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pcdh19Q80TF3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdh19Q80TF3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pcdh19Q80TF3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh19Q80TF3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh19Q80TF3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh19Q80TF3 Gm2399-201ENSMUST00000104944 225 ntBASIC18.02■□□□□ 0.48
Pcdh19Q80TF3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.02■□□□□ 0.48
Pcdh19Q80TF3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh19Q80TF3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh19Q80TF3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pcdh19Q80TF3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh19Q80TF3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh19Q80TF3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh19Q80TF3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh19Q80TF3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pcdh19Q80TF3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdh19Q80TF3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdh19Q80TF3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms