Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3d21Q7TSG5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3d21Q7TSG5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Sh3d21Q7TSG5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sh3d21Q7TSG5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Sh3d21Q7TSG5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Sh3d21Q7TSG5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Sh3d21Q7TSG5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3d21Q7TSG5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3d21Q7TSG5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3d21Q7TSG5 Gm10849-201ENSMUST00000100397 618 ntBASIC20.13■□□□□ 0.81
Sh3d21Q7TSG5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.13■□□□□ 0.81
Sh3d21Q7TSG5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3d21Q7TSG5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3d21Q7TSG5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3d21Q7TSG5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sh3d21Q7TSG5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sh3d21Q7TSG5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sh3d21Q7TSG5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sh3d21Q7TSG5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms