Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rfx4Q7TNK1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx4Q7TNK1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.64■□□□□ 0.42
Rfx4Q7TNK1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rfx4Q7TNK1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
Rfx4Q7TNK1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Rfx4Q7TNK1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.64■□□□□ 0.42
Rfx4Q7TNK1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.64■□□□□ 0.41
Rfx4Q7TNK1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Rfx4Q7TNK1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Gm7860-201ENSMUST00000121190 879 ntBASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.62■□□□□ 0.41
Rfx4Q7TNK1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rfx4Q7TNK1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.6■□□□□ 0.41
Rfx4Q7TNK1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rfx4Q7TNK1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms