Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim45Q6PFY8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.38■□□□□ 0.37
Trim45Q6PFY8 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.38■□□□□ 0.37
Trim45Q6PFY8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.38■□□□□ 0.37
Trim45Q6PFY8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim45Q6PFY8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim45Q6PFY8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim45Q6PFY8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim45Q6PFY8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim45Q6PFY8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim45Q6PFY8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim45Q6PFY8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim45Q6PFY8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim45Q6PFY8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trim45Q6PFY8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Gm7290-201ENSMUST00000104990 617 ntBASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Gm12918-201ENSMUST00000120234 636 ntBASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Gm15710-201ENSMUST00000121821 636 ntBASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Gm5075-201ENSMUST00000196916 622 ntBASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim45Q6PFY8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Trim45Q6PFY8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim45Q6PFY8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim45Q6PFY8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim45Q6PFY8 Mir5133-201ENSMUST00000174955 77 ntBASIC17.34■□□□□ 0.37
Trim45Q6PFY8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim45Q6PFY8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim45Q6PFY8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim45Q6PFY8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim45Q6PFY8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim45Q6PFY8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim45Q6PFY8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim45Q6PFY8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Trim45Q6PFY8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim45Q6PFY8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
Trim45Q6PFY8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim45Q6PFY8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim45Q6PFY8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim45Q6PFY8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim45Q6PFY8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Trim45Q6PFY8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms