Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Rnf220Q6PDX6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rnf220Q6PDX6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf220Q6PDX6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf220Q6PDX6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf220Q6PDX6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rnf220Q6PDX6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rnf220Q6PDX6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf220Q6PDX6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf220Q6PDX6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf220Q6PDX6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf220Q6PDX6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.39■□□□□ 0.37
Rnf220Q6PDX6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf220Q6PDX6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rnf220Q6PDX6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Gm22238-201ENSMUST00000175222 88 ntBASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rnf220Q6PDX6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Gm9959-201ENSMUST00000068277 390 ntBASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.37■□□□□ 0.37
Rnf220Q6PDX6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rnf220Q6PDX6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms